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1

A High-Resolution C. elegans Essential Gene Network Based on Phenotypic Profiling of a Complex Tissue

Rebecca A. Green, Huey-Ling Kao, Anjon Audhya, Swathi Arur, Jonathan R. Mayers, Heidi N. Fridolfsson, Monty Schulman, Siegfried Schloissnig, Sherry Niessen, Kimberley Laband, Shaohe Wang, Daniel A. St

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 3.41 MB

english, 2011

2

Chemoproteomic Discovery of AADACL1 as a Regulator of Human Platelet Activation

Holly, Stephen P., Chang, Jae Won, Li, Weiwei, Niessen, Sherry, Phillips, Ryan M., Piatt, Raymond, Black, Justin L., Smith, Matthew C., Boulaftali, Yacine, Weyrich, Andrew S., Bergmeier, Wolfgang, Cra

Journal:

Chemistry & Biology

Année:

2013

Langue:

english

Fichier:

PDF, 1.47 MB

english, 2013

3

Chemoproteomic profiling reveals that cathepsin D off-target activity drives ocular toxicity of β-secretase inhibitors

Zuhl, Andrea M., Nolan, Charles E., Brodney, Michael A., Niessen, Sherry, Atchison, Kevin, Houle, Christopher, Karanian, David A., Ambroise, Claude, Brulet, Jeffrey W., Beck, Elizabeth M., Doran, Shaw

Journal:

Nature Communications

Année:

2016

Langue:

english

Fichier:

PDF, 1.59 MB

english, 2016

4

Activity-Based Probes for Monitoring Postproline Protease Activity

Eduard Sabidó, Teresa Tarragó, Sherry Niessen, Benjamin F. Cravatt, Ernest Giralt

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 307 KB

english, 2009

5

Selectivity of inhibitors of endocannabinoid biosynthesis evaluated by activity-based protein profiling

Heather S. Hoover, Jacqueline L. Blankman, Sherry Niessen, Benjamin F. Cravatt

Journal:

Bioorganic & Medicinal Chemistry Letters

Année:

2008

Langue:

english

Fichier:

PDF, 807 KB

english, 2008

6

An Enzyme that Regulates Ether Lipid Signaling Pathways in Cancer Annotated by Multidimensional Profiling

Kyle P. Chiang, Sherry Niessen, Alan Saghatelian, Benjamin F. Cravatt

Journal:

Chemistry & Biology

Année:

2006

Langue:

english

Fichier:

PDF, 433 KB

english, 2006

7

Monoacylglycerol Lipase Exerts Dual Control over Endocannabinoid and Fatty Acid Pathways to Support Prostate Cancer

Daniel K. Nomura, Donald P. Lombardi, Jae Won Chang, Sherry Niessen, Anna M. Ward, Jonathan Z. Long, Heather H. Hoover, Benjamin F. Cravatt

Journal:

Chemistry & Biology

Année:

2011

Langue:

english

Fichier:

PDF, 937 KB

english, 2011

8

Proteomic analysis of the coagulation reaction in plasma and whole blood using PROTOMAP

Sherry Niessen, Heather Hoover, Andrew J. Gale

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 329 KB

english, 2011

9

Click-generated triazole ureas as ultrapotent in vivo–active serine hydrolase inhibitors

Adibekian, Alexander, Martin, Brent R, Wang, Chu, Hsu, Ku-Lung, Bachovchin, Daniel A, Niessen, Sherry, Hoover, Heather, Cravatt, Benjamin F

Journal:

Nature Chemical Biology

Année:

2011

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2011

10

Proteomic profiling of metalloprotease activities with cocktails of active-site probes

Sieber, Stephan A, Niessen, Sherry, Hoover, Heather S, Cravatt, Benjamin F

Journal:

Nature Chemical Biology

Année:

2006

Langue:

english

Fichier:

PDF, 555 KB

english, 2006

11

Forward chemical genetic approach identifies new role for GAPDH in insulin signaling

Min, Jaeki, Kyung Kim, Yun, Cipriani, Patricia G, Kang, Mira, Khersonsky, Sonya M, Walsh, Daniel P, Lee, Ji-Young, Niessen, Sherry, Yates, John R, Gunsalus, Kristin

Journal:

Nature Chemical Biology

Année:

2006

Langue:

english

Fichier:

PDF, 239 KB

english, 2006

12

A streamlined platform for high-content functional proteomics of primary human specimens

Noh, Dong-Young, Yates, John R, Jeffrey, Stefanie S, Jessani, Nadim, Niessen, Sherry, Wei, BinQing Q, Nicolau, Monica, Humphrey, Mark, Ji, Youngran, Han, Wonshik

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 370 KB

english, 2005

13

Identifizierung einer selektiven aktivitätsbasierten Sonde für Glycerinaldehyd-3-phosphat-Dehydrogenasen

Dr. Farnusch Kaschani, Dr. Jérôme Clerc, Daniel Krahn, David Bier, Tram Ngoc Hong, Dr. Christian Ottmann, Sherry Niessen, Dr. Tom Colby, Dr. Renier A. L. van der Hoorn, Prof. Dr. Markus Kaiser

Journal:

Angewandte Chemie

Année:

2012

Langue:

german

Fichier:

PDF, 1.08 MB

german, 2012

14

Identification of a Selective, Activity-Based Probe for Glyceraldehyde 3-Phosphate Dehydrogenases

Dr. Farnusch Kaschani, Dr. Jérôme Clerc, Daniel Krahn, David Bier, Tram Ngoc Hong, Dr. Christian Ottmann, Sherry Niessen, Dr. Tom Colby, Dr. Renier A. L. van der Hoorn, Prof. Dr. Markus Kaiser

Journal:

Angewandte Chemie International Edition

Année:

2012

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2012

15

The RON-receptor regulates pancreatic cancer cell migration through phosphorylation-dependent breakdown of the hemidesmosome

Peter T. Yu, Michele Babicky, Dawn Jaquish, Randy French, Karly Marayuma, Evangeline Mose, Sherry Niessen, Heather Hoover, David Shields, David Cheresh, Benjamin F. Cravatt, Andrew M. Lowy

Journal:

International Journal of Cancer

Année:

2012

Langue:

english

Fichier:

PDF, 1.68 MB

english, 2012

16

Resin-based investigation of acyl carrier protein interaction networks in Escherichia coli

Michael Rothmann, Sherry Niessen, Robert W. Haushalter, Benjamin F. Cravatt, Michael D. Burkart

Journal:

Bioorganic & Medicinal Chemistry

Année:

2012

Langue:

english

Fichier:

PDF, 571 KB

english, 2012

17

Highly Selective Inhibitors of Monoacylglycerol Lipase Bearing a Reactive Group that Is Bioisosteric with Endocannabinoid Substrates

Jae Won Chang, Micah J. Niphakis, Kenneth M. Lum, Armand B. Cognetta III, Chu Wang, Megan L. Matthews, Sherry Niessen, Matthew W. Buczynski, Loren H. Parsons, Benjamin F. Cravatt

Journal:

Chemistry & Biology

Année:

2012

Langue:

english

Fichier:

PDF, 1.56 MB

english, 2012

18

Mps1 Phosphorylation of Dam1 Couples Kinetochores to Microtubule Plus Ends at Metaphase

Michelle M. Shimogawa, Beth Graczyk, Melissa K. Gardner, Susan E. Francis, Erin A. White, Michael Ess, Jeffrey N. Molk, Cristian Ruse, Sherry Niessen, John R. Yates III, Eric G.D. Muller, Kerry Bloom,

Journal:

Current Biology

Année:

2006

Langue:

english

Fichier:

PDF, 857 KB

english, 2006

19

The CREB Coactivator TORC2 Functions as a Calcium- and cAMP-Sensitive Coincidence Detector

Robert A. Screaton, Michael D. Conkright, Yoshiko Katoh, Jennifer L. Best, Gianluca Canettieri, Shawn Jeffries, Ernesto Guzman, Sherry Niessen, John R. Yates III, Hiroshi Takemori, Mitsuhiro Okamoto,

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 834 KB

english, 2004

20

Monoacylglycerol Lipase Regulates a Fatty Acid Network that Promotes Cancer Pathogenesis

Daniel K. Nomura, Jonathan Z. Long, Sherry Niessen, Heather S. Hoover, Shu-Wing Ng, Benjamin F. Cravatt

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 2.19 MB

english, 2010

21

A Hormone-Dependent Module Regulating Energy Balance

Biao Wang, Noel Moya, Sherry Niessen, Heather Hoover, Maria M. Mihaylova, Reuben J. Shaw, John R. Yates III, Wolfgang H. Fischer, John B. Thomas, Marc Montminy

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2011

22

Competitive Activity-Based Protein Profiling Identifies Aza-β-Lactams as a Versatile Chemotype for Serine Hydrolase Inhibition

Zuhl, Andrea M., Mohr, Justin T., Bachovchin, Daniel A., Niessen, Sherry, Hsu, Ku-Lung, Berlin, Jacob M., Dochnahl, Maximilian, López-Alberca, María P., Fu, Gregory C., Cravatt, Benjamin F.

Journal:

Journal of the American Chemical Society

Année:

2012

Langue:

english

Fichier:

PDF, 2.44 MB

english, 2012

23

Single-Step Inline Hydroxyapatite Enrichment Facilitates Identification and Quantitation of Phosphopeptides from Mass-Limited Proteomes with MudPIT

Fonslow, Bryan R., Niessen, Sherry M., Singh, Meha, Wong, Catherine C. L., Xu, Tao, Carvalho, Paulo C., Choi, Jeong, Park, Sung Kyu, Yates, John R.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.80 MB

english, 2012

24

Integrated phenotypic and activity-based profiling links Ces3 to obesity and diabetes

Dominguez, Eduardo, Galmozzi, Andrea, Chang, Jae Won, Hsu, Ku-Lung, Pawlak, Joanna, Li, Weiwei, Godio, Cristina, Thomas, Jason, Partida, David, Niessen, Sherry, O'Brien, Paul E, Russell, Aaron P, Watt

Journal:

Nature Chemical Biology

Année:

2013

Langue:

english

Fichier:

PDF, 2.47 MB

english, 2013

25

A Chemical Biology Approach to Interrogate Quorum-Sensing Regulated Behaviors at the Molecular and Cellular Level

Lowery, Colin A., Matamouros, Susana, Niessen, Sherry, Zhu, Jie, Scolnick, Jonathan, Lively, Jenny M., Cravatt, Benjamin F., Miller, Samuel I., Kaufmann, Gunnar F., Janda, Kim D.

Journal:

Chemistry & Biology

Année:

2013

Langue:

english

Fichier:

PDF, 850 KB

english, 2013

26

Direct Binding of SAS-6 to ZYG-1 Recruits SAS-6 to the Mother Centriole for Cartwheel Assembly

Lettman, Molly M., Wong, Yao Liang, Viscardi, Valeria, Niessen, Sherry, Chen, Sheng-hong, Shiau, Andrew K., Zhou, Huilin, Desai, Arshad, Oegema, Karen

Journal:

Developmental Cell

Année:

2013

Langue:

english

Fichier:

PDF, 2.62 MB

english, 2013

27

LDL Receptor-Related Protein 1 Regulates the Abundance of Diverse Cell-Signaling Proteins in the Plasma Membrane Proteome

Gaultier, Alban, Simon, Gabriel, Niessen, Sherry, Dix, Melissa, Takimoto, Shinako, Cravatt, Benjamin F., Gonias, Steven L.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.79 MB

english, 2010

28

Practical 4′-Phosphopantetheine Active Site Discovery from Proteomic Samples

Meier, Jordan L., Patel, Anand D., Niessen, Sherry, Meehan, Michael, Kersten, Roland, Yang, Jane Y., Rothmann, Michael, Cravatt, Benjamin F., Dorrestein, Pieter C., Burkart, Michael D., Bafna, Vineet

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.75 MB

english, 2011

29

An Orthogonal Active Site Identification System (OASIS) for Proteomic Profiling of Natural Product Biosynthesis

Meier, Jordan L., Niessen, Sherry, Hoover, Heather S., Foley, Timothy L., Cravatt, Benjamin F., Burkart, Michael D.

Journal:

ACS Chemical Biology

Année:

2009

Langue:

english

Fichier:

PDF, 2.85 MB

english, 2009

30

A road map to evaluate the proteome-wide selectivity of covalent kinase inhibitors

Lanning, Bryan R, Whitby, Landon R, Dix, Melissa M, Douhan, John, Gilbert, Adam M, Hett, Erik C, Johnson, Theodore O, Joslyn, Chris, Kath, John C, Niessen, Sherry, Roberts, Lee R, Schnute, Mark E, Wan

Journal:

Nature Chemical Biology

Année:

2014

Langue:

english

Fichier:

PDF, 2.08 MB

english, 2014

31

Metabolomics annotates ABHD3 as a physiologic regulator of medium-chain phospholipids

Long, Jonathan Z, Cisar, Justin S, Milliken, David, Niessen, Sherry, Wang, Chu, Trauger, Sunia A, Siuzdak, Gary, Cravatt, Benjamin F

Journal:

Nature Chemical Biology

Année:

2011

Langue:

english

Fichier:

PDF, 341 KB

english, 2011

32

Click-generated triazole ureas as ultrapotent in vivo–active serine hydrolase inhibitors

Adibekian, Alexander, Martin, Brent R, Wang, Chu, Hsu, Ku-Lung, Bachovchin, Daniel A, Niessen, Sherry, Hoover, Heather, Cravatt, Benjamin F

Journal:

Nature Chemical Biology

Année:

2012

Langue:

english

Fichier:

PDF, 58 KB

english, 2012

33

Selective Inhibitor of Platelet-Activating Factor Acetylhydrolases 1b2 and 1b3 That Impairs Cancer Cell Survival

Chang, Jae Won, Zuhl, Andrea M., Speers, Anna E., Niessen, Sherry, Brown, Steven J., Mulvihill, Melinda M., Fan, Yi Chiao, Spicer, Timothy P., Southern, Mark, Scampavia, Louis, Fernandez-Vega, Virneli

Journal:

ACS Chemical Biology

Année:

2015

Langue:

english

Fichier:

PDF, 2.64 MB

english, 2015

34

RBBP9: A Tumor-Associated Serine Hydrolase Activity Required for Pancreatic Neoplasia

David J. Shields, Sherry Niessen, Eric A. Murphy, Ainhoa Mielgo, Jay S. Desgrosellier, Steven K. M. Lau, Leo A. Barnes, Jacqueline Lesperance, Michael Bouvet, David Tarin, Benjamin F. Cravatt, David A

Journal:

Proceedings of the National Academy of Sciences

Année:

2010

Langue:

english

Fichier:

PDF, 1.64 MB

english, 2010

35

The proteome of mouse brain microvessel membranes and basal lamina

Chun, Hyun Bae, Scott, Michael, Niessen, Sherry, Hoover, Heather, Baird, Andrew, Yates, John, Torbett, Bruce E, Eliceiri, Brian P

Journal:

Journal of Cerebral Blood Flow and Metabolism

Année:

2011

Langue:

english

Fichier:

PDF, 645 KB

english, 2011

36

Pseudomonas syringae pv. syringae Uses Proteasome Inhibitor Syringolin A to Colonize from Wound Infection Sites

Misas-Villamil, Johana C., Kolodziejek, Izabella, Crabill, Emerson, Kaschani, Farnusch, Niessen, Sherry, Shindo, Takayuki, Kaiser, Markus, Alfano, James R., van der Hoorn, Renier A. L., Dangl, Jeffery

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.95 MB

english, 2013

37

Genomic insights into the physiology and ecology of the marine filamentous cyanobacterium Lyngbya majuscula

Adam C. Jones, Emily A. Monroe, Sheila Podell, Wolfgang R. Hess, Sven Klages, Eduardo Esquenazi, Sherry Niessen, Heather Hoover, Michael Rothmann, Roger S. Lasken, John R. Yates III, Richard Reinhardt

Journal:

Proceedings of the National Academy of Sciences

Année:

2011

Langue:

english

Fichier:

PDF, 1.61 MB

english, 2011

38

Superfamily-wide portrait of serine hydrolase inhibition achieved by library-versus-library screening

Daniel A. Bachovchin, Tianyang Ji, Weiwei Li, Gabriel M. Simon, Jacqueline L. Blankman, Alexander Adibekian, Heather Hoover, Sherry Niessen, Benjamin F. Cravatt and Kevan M. Shokat

Journal:

Proceedings of the National Academy of Sciences

Année:

2010

Langue:

english

Fichier:

PDF, 1.63 MB

english, 2010

39

Polo-Like Kinase 4 Kinase Activity Limits Centrosome Overduplication by Autoregulating Its Own Stability

Andrew J. Holland, Weijie Lan, Sherry Niessen, Heather Hoover and Don W. Cleveland

Journal:

The Journal of Cell Biology

Année:

2010

Langue:

english

Fichier:

PDF, 1.69 MB

english, 2010

40

Proteasome Activity Imaging and Profiling Characterizes Bacterial Effector Syringolin A

Izabella Kolodziejek, Johana C. Misas-Villamil, Farnusch Kaschani, Jérôme Clerc, Christian Gu, Daniel Krahn, Sherry Niessen, Martijn Verdoes, Lianne I. Willems, Hermen S. Overkleeft, Markus Kaiser and

Journal:

PLANT PHYSIOLOGY

Année:

2011

Langue:

english

Fichier:

PDF, 3.47 MB

english, 2011

41

The relationship between non-communicable disease occurrence and poverty—evidence from demographic surveillance in Matlab, Bangladesh

Mirelman, Andrew J., Rose, Sherri, Khan, Jahangir A.M., Ahmed, Sayem, Peters, David H., Niessen, Louis W., Trujillo, Antonio J.

Journal:

Health Policy and Planning

Année:

2016

Langue:

english

Fichier:

PDF, 164 KB

english, 2016

42

The Yeast Igl Family Member Sro7p Is an Effector of the Secretory Rab GTPase Sec4p

Bianka L. Grosshans, Anna Andreeva, Akanksha Gangar, Sherry Niessen, John R. Yates III, Patrick Brennwald and Peter Novick

Journal:

The Journal of Cell Biology

Année:

2006

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2006

43

Subclassification and Biochemical Analysis of Plant Papain-Like Cysteine Proteases Displays Subfamily-Specific Characteristics

Kerstin H. Richau, Farnusch Kaschani, Martijn Verdoes, Twinkal C. Pansuriya, Sherry Niessen, Kurt Stüber, Tom Colby, Hermen S. Overkleeft, Matthew Bogyo and Renier A.L. Van der Hoorn

Journal:

PLANT PHYSIOLOGY

Année:

2012

Langue:

english

Fichier:

PDF, 3.99 MB

english, 2012

44

Breast Cancer Cell Lines Grown In Vivo: What Goes in Isn’t Always the Same as What Comes Out

Jessani, Nadim, Niessen, Sherry

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 619 KB

english, 2005

45

Introduction to Peptides and Proteins || Chemical Synthesis of Peptides and Proteins

Langel, Sherry, Cravatt, Ulo, Graslund, Benjamin, von Heijne, Astrid, Zorko, N, Land, Matjaz, Niessen, Tiit

Année:

2009

Langue:

english

Fichier:

PDF, 518 KB

english, 2009

46

Chemoselective Preparation of Clickable Aryl Sulfonyl Fluoride Monomers: A Toolbox of Highly Functionalized Intermediates for Chemical Biology Probe Synthesis

Fadeyi, Olugbeminiyi, Parikh, Mihir D., Chen, Ming Z., Kyne, Robert E., Taylor, Alexandria P., O'Doherty, Inish, Kaiser, Stephen E., Barbas, Sabrina, Niessen, Sherry, Shi, Manli, Weinrich, Scott L., K

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 1.33 MB

english, 2016

47

Discovery of enzymatic targets of transcriptional activators via in vivo covalent chemical capture

Dugan, Amanda, Majmudar, Chinmay Y, Pricer, Rachel E., Niessen, Sherry, Lancia, Jody K, Fung, Hugo Yik-Hong, Cravatt, Benjamin F., Mapp, Anna K

Journal:

Journal of the American Chemical Society

Année:

2016

Langue:

english

Fichier:

PDF, 907 KB

english, 2016

48

Major Cys protease activities are not essential for senescence in individually darkened Arabidopsis leaves

Pružinská, Adriana, Shindo, Takayuki, Niessen, Sherry, Kaschani, Farnusch, Tóth, Réka, Millar, A. Harvey, van der Hoorn, Renier A. L.

Journal:

BMC Plant Biology

Année:

2017

Langue:

english

Fichier:

PDF, 2.84 MB

english, 2017

49

Proteome-wide Map of Targets of T790M-EGFR-Directed Covalent Inhibitors

Niessen, Sherry, Dix, Melissa M., Barbas, Sabrina, Potter, Zachary E., Lu, Shuyan, Brodsky, Oleg, Planken, Simon, Behenna, Douglas, Almaden, Chau, Gajiwala, Ketan S., Ryan, Kevin, Ferre, RoseAnn, Laze

Journal:

Cell Chemical Biology

Année:

2017

Langue:

english

Fichier:

PDF, 2.75 MB

english, 2017

50

Effects of Activating Mutations on EGFR Cellular Protein Turnover and Amino Acid Recycling Determined Using SILAC Mass Spectrometry

Greig, Michael J., Niessen, Sherry, Weinrich, Scott L., Feng, Jun Li, Shi, Manli, Johnson, Ted O.

Journal:

International Journal of Cell Biology

Année:

2015

Langue:

english

Fichier:

PDF, 1.34 MB

english, 2015